Gene: Ah.11g046970
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g046970
- Transcript Identifier Ah.11g046970-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 16664956-16668449 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D001247
- #Genes/#Species 448/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Ah.11g046970-v1.1.a1
Descriptions
- Description Probable beta-1,4-xylosyltransferase IRX10L (EC 2.4.2.-) (Glucuronoxylan glucuronosyltransferase 1) (AtGUT1) (Glucuronoxylan glucuronosyltransferase 2) (AtGUT2) (Protein IRREGULAR XYLEM 10-like) (Xylan xylosyltransferase IRX10L)
- note Probable beta-1,4-xylosyltransferase IRX10L (EC 2.4.2.-) (Glucuronoxylan glucuronosyltransferase 1) (AtGUT1) (Glucuronoxylan glucuronosyltransferase 2) (AtGUT2) (Protein IRREGULAR XYLEM 10-like) (Xylan xylosyltransferase IRX10L)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006486 | IEA | InterPro | protein glycosylation | |
| GO:0045492 | ISO | PLAZA Integrative Orthology | xylan biosynthetic process | AT5G61840 |
| GO:0010417 | ISO | PLAZA Integrative Orthology | glucuronoxylan biosynthetic process | AT5G61840 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT5G61840 |
| GO:0042546 | ISO | PLAZA Integrative Orthology | cell wall biogenesis | AT5G61840 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016757 | IEA | InterPro | glycosyltransferase activity | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0080116 | ISO | PLAZA Integrative Orthology | glucuronoxylan glucuronosyltransferase activity | AT5G61840 |
| GO:0047517 | ISO | PLAZA Integrative Orthology | 1,4-beta-D-xylan synthase activity | AT5G61840 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G61840 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT5G61840 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G61840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.3.2 | Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX10) |