Gene: Ah.11g043840
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g043840
- Transcript Identifier Ah.11g043840-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 11978155-11980535 : negative
Gene Family Information
- ID HOM05D000187
- #Genes/#Species 2054/100
- Phylogenetic origin
- ID ORTHO05D000230
- #Genes/#Species 1330/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Ah.11g043840-v1.1.a1
Descriptions
- Description Probable E3 ubiquitin-protein ligase HIP1 (EC 2.3.2.27) (HAL3-interacting protein 1) (OsHIP1) (RING-H2 finger HIP1) (RING-type E3 ubiquitin transferase HIP1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051865 | ISO | PLAZA Integrative Orthology | protein autoubiquitination | AT5G10650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | ISO | PLAZA Integrative Orthology | ubiquitin protein ligase activity | AT5G10650 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G10650 |
| GO:0008017 | ISO | PLAZA Integrative Orthology | microtubule binding | AT5G10650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G10650 |
| GO:0097427 | ISO | PLAZA Integrative Orthology | microtubule bundle | AT5G10650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.3.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.CTL-subclass ligase |