Gene: Ah.11g043690
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g043690
- Transcript Identifier Ah.11g043690-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 11743201-11753486 : negative
Gene Family Information
- ID HOM05D002728
- #Genes/#Species 253/98
- Phylogenetic origin
- ID ORTHO05D002874
- #Genes/#Species 256/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.11g043690-v1.1.a1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006414 | IEA | InterPro | translational elongation | |
GO:0016458 | ISO | PLAZA Integrative Orthology | gene silencing | AT2G24490 |
GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT2G24490 |
GO:0006260 | ISO | PLAZA Integrative Orthology | DNA replication | AT2G24490 |
GO:0000724 | ISO | PLAZA Integrative Orthology | double-strand break repair via homologous recombination | AT3G02920 |
GO:0006310 | ISO | PLAZA Homology (enrichment) | DNA recombination | HOM05D002728 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003924 | IEA | InterPro | GTPase activity | |
GO:0005525 | IEA | InterPro | GTP binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003746 | IEA | InterPro | translation elongation factor activity | |
GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D002728 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G02920 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G02920 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR033720 | Elongation factor Tu, domain 2 |
IPR000795 | Translational (tr)-type GTP-binding domain |
IPR036388 | Winged helix-like DNA-binding domain superfamily |
IPR004161 | Translation elongation factor EFTu-like, domain 2 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
IPR012340 | Nucleic acid-binding, OB-fold |
IPR036390 | Winged helix DNA-binding domain superfamily |
IPR009001 | Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal |
IPR004160 | Translation elongation factor EFTu/EF1A, C-terminal |
IPR009000 | Translation protein, beta-barrel domain superfamily |
IPR004541 | Translation elongation factor EFTu/EF1A, bacterial/organelle |
IPR014892 | Replication protein A, C-terminal |
Mapman id | Description |
---|---|
13.2.3.5.2 | Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA2 |
13.3.5.4.4.2 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.component RPA2 |
17.7.4.1 | Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Tu) |