Gene: Ah.11g043690

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.11g043690
  • Transcript Identifier Ah.11g043690-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_11 : 11743201-11753486 : negative

Gene Family Information

  • ID HOM05D002728
  • #Genes/#Species 253/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.11g043690-v1.1.a1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
InterProtranslational elongation
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT2G24490
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT2G24490
GO:0006260
ISO
PLAZA Integrative OrthologyDNA replication AT2G24490
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT3G02920
GO:0006310
ISO
PLAZA Homology (enrichment)DNA recombination HOM05D002728

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003746
IEA
InterProtranslation elongation factor activity
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D002728
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G02920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G02920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033720 Elongation factor Tu, domain 2
IPR000795 Translational (tr)-type GTP-binding domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 Nucleic acid-binding, OB-fold
IPR036390 Winged helix DNA-binding domain superfamily
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR009000 Translation protein, beta-barrel domain superfamily
IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle
IPR014892 Replication protein A, C-terminal
Mapman id Description
13.2.3.5.2 Cell cycle organisation.DNA replication.elongation.single-stranded-DNA binding RPA complex.component RPA2
13.3.5.4.4.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.component RPA2
17.7.4.1 Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Tu)