Gene: Ah.04g157970
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.04g157970
- Transcript Identifier Ah.04g157970-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_4 : 15227899-15250123 : negative
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D006071
- #Genes/#Species 148/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.04g157970-v1.1.a1
Descriptions
- Description DNA excision repair protein ERCC-6-like (EC 3.6.4.12) (ATP-dependent helicase ERCC6-like)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045951 | ISO | PLAZA Integrative Orthology | positive regulation of mitotic recombination | AT5G63950 |
| GO:2000014 | ISO | PLAZA Integrative Orthology | regulation of endosperm development | Os04g0692750 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT5G63950 |
| GO:0010965 | ISO | PLAZA Integrative Orthology | regulation of mitotic sister chromatid separation | Os04g0692750 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os04g0692750 |
| GO:0005694 | ISO | PLAZA Integrative Orthology | chromosome | Os04g0692750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Mapman id | Description |
|---|---|
| 12.4.8.2.3 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (ERCC6) |