Gene: Ah.01g016930
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.01g016930
- Transcript Identifier Ah.01g016930-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_1 : 27368447-27391865 : negative
Gene Family Information
- ID HOM05D000528
- #Genes/#Species 1033/100
- Phylogenetic origin
- ID ORTHO05D000999
- #Genes/#Species 524/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.01g016930-v1.1.a1
Descriptions
- Description Brefeldin A-inhibited guanine nucleotide-exchange protein 5 (BIG5) (ARF guanine-nucleotide exchange factor BIG5) (Protein BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE 1) (Protein BEN1) (Protein HOPM INTERACTOR 7)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032012 | IEA | InterPro | regulation of ARF protein signal transduction | |
| GO:0016192 | ISO | PLAZA Integrative Orthology | vesicle-mediated transport | AT3G43300 |
| GO:0006955 | ISO | PLAZA Integrative Orthology | immune response | AT3G43300 |
| GO:0045087 | ISO | PLAZA Integrative Orthology | innate immune response | AT3G43300 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G43300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005085 | IEA | InterPro | guanyl-nucleotide exchange factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G43300 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005769 | ISO | PLAZA Integrative Orthology | early endosome | AT3G43300 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT3G43300 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G43300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015403 | Sec7, C-terminal |
| IPR032629 | Mon2, dimerisation and cyclophilin-binding domain |
| IPR023394 | Sec7, C-terminal domain superfamily |
| IPR032691 | Guanine nucleotide exchange factor, N-terminal |
| IPR000904 | Sec7 domain |
| IPR016024 | Armadillo-type fold |
| IPR011989 | Armadillo-like helical |
| IPR035999 | Sec7 domain superfamily |
| IPR032817 | Mon2, C-terminal |
| Mapman id | Description |
|---|---|
| 22.3.2.2.2 | Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (BIG) |