Gene: AUR62034564

General Information

Structural Information

Species Chenopodium quinoa
Gene Identifier AUR62034564
Transcript Identifier AUR62034564-RA
Gene Type Coding gene
Location C_Quinoa_Scaffold_1522 : 2608661-2609353 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000854
#Genes/#Species 698/92
Phylogenetic origin

ID ORTHO05D000778
#Genes/#Species 616/93
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id AUR62034564.v1.0
pacid 36299426
uniprot A0A803MSL3

Descriptions

Short descriptions
Ortholog descriptions

Description At4g30220: Probable small nuclear ribonucleoprotein F

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	GOA Database	mRNA splicing, via spliceosome
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0000387	IEA	GOA Database	spliceosomal snRNP assembly
GO:0000387	IEA	InterPro	spliceosomal snRNP assembly

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005681	IEA	GOA Database	spliceosomal complex
GO:0005681	IEA	InterPro	spliceosomal complex

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR010920	LSM domain superfamily
IPR001163	LSM domain, eukaryotic/archaea-type
IPR016487	Sm-like protein Lsm6/SmF
IPR034100	Small nuclear ribonucleoprotein F

Mapman id	Description
16.2.2.6	RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-F