Gene: ATR0827G038

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0827G038
  • Transcript Identifier ATR0827G038.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00047 : 837181-838923 : positive

Gene Family Information

  • ID HOM05D001060
  • #Genes/#Species 575/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00047.20.v1.0
  • pacid 31563732

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009584
IEA
InterProdetection of visible light
GO:0018298
IEA
InterProprotein-chromophore linkage
GO:0009585
ISO
PLAZA Homology (enrichment)red, far-red light phototransduction HOM05D001060
GO:0007165
ISO
PLAZA Homology (enrichment)signal transduction HOM05D001060
GO:0017006
ISO
PLAZA Homology (enrichment)protein-tetrapyrrole linkage HOM05D001060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000155
ISO
PLAZA Homology (enrichment)phosphorelay sensor kinase activity HOM05D001060
GO:0042803
ISO
PLAZA Homology (enrichment)protein homodimerization activity HOM05D001060
GO:0009881
ISO
PLAZA Homology (enrichment)photoreceptor activity HOM05D001060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003018 GAF domain
IPR035965 PAS domain superfamily
IPR013654 PAS fold-2
IPR029016 GAF-like domain superfamily
IPR013515 Phytochrome, central region
IPR001294 Phytochrome
IPR043150 Phytochrome, PHY domain
Mapman id Description
26.1.1.1 External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)