Gene: ATR0782G093

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0782G093
  • Transcript Identifier ATR0782G093.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00038 : 3473039-3501497 : positive

Gene Family Information

  • ID HOM05D003897
  • #Genes/#Species 179/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00038.137.v1.0
  • pacid 31570924

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0010374
ISO
PLAZA Integrative Orthologystomatal complex development AT2G15430
GO:0010375
ISO
PLAZA Integrative Orthologystomatal complex patterning AT2G15430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G15400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G15430
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT2G15400
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G15430
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT2G15400
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G15430
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT2G15400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR036603 RNA polymerase, RBP11-like subunit
IPR036643 DNA-directed RNA polymerase, insert domain superfamily
IPR011262 DNA-directed RNA polymerase, insert domain
Mapman id Description
15.1.6.1 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 3