Gene: AT5G66940
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G66940
- Transcript Identifier AT5G66940.1
- Gene Type Coding gene
- Location Chr5 : 26727989-26728666 : negative
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G66940.1
- Alias ATDOF5.8
- uniprot Q9FGD6
Descriptions
- Description Dof-type zinc finger DNA-binding family protein
- Computational description Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF binding protein 1 (TAIR:AT3G50410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IDA ISS | Gene Ontology | DNA-binding transcription factor activity | 1 2 |
| GO:0000976 | IDA | Gene Ontology | transcription cis-regulatory region binding | 2 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IPI | Gene Ontology | DNA binding | 2 |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008270 | IDA | Gene Ontology | zinc ion binding | 3 |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |