Gene: AT5G66920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G66920
  • Transcript Identifier AT5G66920.1
  • Gene Type Coding gene
  • Location Chr5 : 26722963-26725370 : positive

Gene Family Information

  • ID HOM05D000201
  • #Genes/#Species 1953/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G66920.1
  • symbol sks17
  • full_name SKU5 similar 17
  • uniprot Q8LPS9

Descriptions

  • Description SKU5 similar 17
  • Computational description SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080167
IEP
GOA Databaseresponse to karrikin

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
IEA
Gene Ontologycopper ion binding
GO:0005507
IEA
InterProcopper ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IBA
Gene Ontologyoxidoreductase activity1
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005618
HDA
Gene Ontologycell wall2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008972 Cupredoxin
IPR011707 Multicopper oxidase, N-termianl
IPR011706 Multicopper oxidase, C-terminal
IPR045087 Multicopper oxidase
IPR034273 Ascorbate oxidase homologue, first cupredoxin domain
IPR001117 Multicopper oxidase, type 1
Mapman id Description
50.1.10 Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor