Gene: AT5G65920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G65920
  • Transcript Identifier AT5G65920.1
  • Gene Type Coding gene
  • Location Chr5 : 26364323-26365657 : negative

Gene Family Information

  • ID HOM05D002992
  • #Genes/#Species 230/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G65920.1
  • uniprot Q9FHN9

Descriptions

  • Description ARM repeat superfamily protein
  • Computational description ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G49810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:1900457
ISO
PLAZA Integrative Orthologyregulation of brassinosteroid mediated signaling pathway Os03g0232600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
Gene Ontologyubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity Os03g0232600
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os03g0232600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane Os03g0232600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003613 U box domain
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase