Gene: AT5G65350
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G65350
- Transcript Identifier AT5G65350.1
- Gene Type Coding gene
- Location Chr5 : 26119406-26119825 : negative
Gene Family Information
- ID HOM05D000288
- #Genes/#Species 1531/100
- Phylogenetic origin
- ID ORTHO05D000173
- #Genes/#Species 1498/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G65350.1
- symbol HTR11
- uniprot Q9FKQ3
Descriptions
- Description histone 3 11
- Computational description histone 3 11 (HTR11); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046982 | IEA | Gene Ontology | protein heterodimerization activity | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
| GO:0009536 | HDA | Gene Ontology | plastid | 2 |
| GO:0005694 | IEA | GOA Database | chromosome | |
| GO:0000786 | IEA | GOA Database | nucleosome | |
| GO:0000786 | IEA | InterPro | nucleosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.1.3 | Chromatin organisation.chromatin structure.DNA wrapping.histone (H3) |