Gene: AT5G60390

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G60390
  • Transcript Identifier AT5G60390.1
  • Gene Type Coding gene
  • Location Chr5 : 24289226-24290675 : positive

Gene Family Information

  • ID HOM05D000280
  • #Genes/#Species 1564/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G60390.1
  • uniprot Q8GTY0

Descriptions

  • Description GTP binding Elongation factor Tu family protein
  • Computational description GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0006414
IBA
Gene Ontologytranslational elongation1
GO:0006414
IEA
InterProtranslational elongation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G07940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IBA
Gene OntologyGTPase activity1
GO:0003924
IEA
InterProGTPase activity
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0003746
IBA
Gene Ontologytranslation elongation factor activity1
GO:0003746
IEA
InterProtranslation elongation factor activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003729
IDA
Gene OntologymRNA binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion4
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma5
GO:0005737
IDA
IEA
GOA Databasecytoplasm
GO:0005737
HDA
ISM
Gene Ontologycytoplasm6
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus6
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane7
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G07940
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G07940
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G07940
GO:0005794
RCA
Gene OntologyGolgi apparatus8
GO:0000325
HDA
Gene Ontologyplant-type vacuole9
GO:0005829
RCA
Gene Ontologycytosol10
GO:0048471
IEA
GOA Databaseperinuclear region of cytoplasm
GO:0048471
IDA
Gene Ontologyperinuclear region of cytoplasm2
GO:0005773
IDA
GOA Databasevacuole

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004539 Translation elongation factor EF1A, eukaryotic/archaeal
IPR000795 Translational (tr)-type GTP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR009000 Translation protein, beta-barrel domain superfamily
Mapman id Description
17.5.1.1 Protein biosynthesis.translation elongation.eEF1 aminoacyl-tRNA binding factor activity.aminoacyl-tRNA binding factor (eEF1A)