Gene: AT5G60142

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G60142
  • Transcript Identifier AT5G60142.2
  • Gene Type Coding gene
  • Location Chr5 : 24216669-24217591 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT5G60142.2
  • uniprot Q9LST3

Descriptions

  • Description AP2/B3-like transcriptional factor family protein
  • Computational description AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010198
ISO
PLAZA Tree-based Orthologysynergid death AT5G60140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046982
ISO
PLAZA Tree-based Orthologyprotein heterodimerization activity AT5G60140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
Mapman id Description
15.5.5.2 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (REM)