Gene: AT5G58080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G58080
  • Transcript Identifier AT5G58080.1
  • Gene Type Coding gene
  • Location Chr5 : 23501785-23504150 : negative

Gene Family Information

  • ID HOM05D000196
  • #Genes/#Species 1985/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G58080.1
  • symbol RR18
  • Alias ARR18,response regulator 18
  • uniprot Q9FGT7

Descriptions

  • Description response regulator 18
  • Computational description response regulator 18 (RR18); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 83273 Blast hits to 82938 proteins in 2948 species: Archae - 359; Bacteria - 74242; Metazoa - 38; Fungi - 293; Plants - 2583; Viruses - 2; Other Eukaryotes - 5756 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000160
IEA
GOA Databasephosphorelay signal transduction system
GO:0000160
IEA
InterProphosphorelay signal transduction system
GO:0007165
IEA
GOA Databasesignal transduction
GO:0007165
IEA
InterProsignal transduction
GO:0009736
IEA
GOA Databasecytokinin-activated signaling pathway
GO:0009736
IMP
TAS
Gene Ontologycytokinin-activated signaling pathway1 2
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
IEA
Gene OntologyDNA-binding transcription factor activity3
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000156
ISS
Gene Ontologyphosphorelay response regulator activity
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
IPR017053 Response regulator B-type, plant
IPR001789 Signal transduction response regulator, receiver domain
IPR006447 Myb domain, plants
IPR011006 CheY-like superfamily
Mapman id Description
11.4.2.4 Phytohormone action.cytokinin.perception and signal transduction.B-type ARR response activator
15.5.23 RNA biosynthesis.transcriptional regulation.transcription factor (ARR-B)