Gene: AT5G56970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G56970
  • Transcript Identifier AT5G56970.1
  • Gene Type Coding gene
  • Location Chr5 : 23044944-23048245 : negative

Gene Family Information

  • ID HOM05D000597
  • #Genes/#Species 940/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G56970.1
  • symbol CKX3
  • Alias ATCKX3
  • uniprot Q9LTS3

Descriptions

  • Description cytokinin oxidase 3
  • Computational description cytokinin oxidase 3 (CKX3); FUNCTIONS IN: primary amine oxidase activity, cytokinin dehydrogenase activity; INVOLVED IN: cytokinin catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), Oxygen oxidoreductase covalent FAD-binding site (InterPro:IPR006093), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase 4 (TAIR:AT4G29740.2); Has 7950 Blast hits to 7944 proteins in 1387 species: Archae - 176; Bacteria - 4485; Metazoa - 150; Fungi - 1601; Plants - 789; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009735
ISO
PLAZA Integrative Orthologyresponse to cytokinin Solyc12g008900.2
GO:0010229
ISO
PLAZA Integrative Orthologyinflorescence development Os01g0197700
GO:0009690
IEA
Gene Ontologycytokinin metabolic process
GO:0009690
IEA
InterProcytokinin metabolic process
GO:0009823
IDA
TAS
Gene Ontologycytokinin catabolic process1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0019139
IDA
TAS, IEA
Gene Ontologycytokinin dehydrogenase activity2 3
GO:0019139
IEA
InterProcytokinin dehydrogenase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IBA
Gene Ontologyoxidoreductase activity4
GO:0016491
IEA
InterProoxidoreductase activity
GO:0050660
IEA
GOA Databaseflavin adenine dinucleotide binding
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0008131
IDA
Gene Ontologyprimary amine oxidase activity1
GO:0071949
IEA
Gene OntologyFAD binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
IEA
GOA Databasevacuole
GO:0005773
IDA
Gene Ontologyvacuole3
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036318 FAD-binding, type PCMH-like superfamily
IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily
IPR006094 FAD linked oxidase, N-terminal
IPR015345 Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
IPR016169 FAD-binding, type PCMH, subdomain 2
IPR016167 FAD-binding, type PCMH, subdomain 1
IPR016164 FAD-linked oxidase-like, C-terminal
Mapman id Description
11.4.3.2 Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase