Gene: AT5G56950
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G56950
- Transcript Identifier AT5G56950.1
- Gene Type Coding gene
- Location Chr5 : 23032618-23035299 : positive
Gene Family Information
- ID HOM05D001215
- #Genes/#Species 514/98
- Phylogenetic origin
- ID ORTHO05D001387
- #Genes/#Species 418/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G56950.1
- symbol NAP1%3B3
- Alias NFA03,NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 03,NFA3,NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A3
- full_name nucleosome assembly protein 1%3B3
- uniprot Q94K07
Descriptions
- Description nucleosome assembly protein 1;3
- Computational description nucleosome assembly protein 1;3 (NAP1;3); CONTAINS InterPro DOMAIN/s: Nucleosome assembly protein (NAP) (InterPro:IPR002164); BEST Arabidopsis thaliana protein match is: nucleosome assembly protein1;1 (TAIR:AT4G26110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006334 | IEA | GOA Database | nucleosome assembly | |
| GO:0006334 | IBA | Gene Ontology | nucleosome assembly | 1 |
| GO:0006334 | IEA | InterPro | nucleosome assembly | |
| GO:0016444 | IMP IBA | Gene Ontology | somatic cell DNA recombination | 1 2 |
| GO:0000724 | IGI | Gene Ontology | double-strand break repair via homologous recombination | 3 |
| GO:0006281 | IGI | Gene Ontology | DNA repair | 4 |
| GO:0009294 | IMP | Gene Ontology | DNA mediated transformation | 5 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042393 | IDA IBA | Gene Ontology | histone binding | 1 4 |
| GO:0003682 | IDA IBA | Gene Ontology | chromatin binding | 1 4 |
| GO:0042802 | IPI | Gene Ontology | identical protein binding | 4 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 4 |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 4 |
| GO:0000785 | IBA | Gene Ontology | chromatin | 1 |
| GO:0009536 | HDA | Gene Ontology | plastid | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.2.6 | Chromatin organisation.histone chaperone activities.histone chaperone (NAP) |