Gene: AT5G55230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G55230
- Transcript Identifier AT5G55230.1
- Gene Type Coding gene
- Location Chr5 : 22402716-22405182 : positive
Gene Family Information
- ID HOM05D000504
- #Genes/#Species 1062/98
- Phylogenetic origin
- ID ORTHO05D000403
- #Genes/#Species 985/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G55230.1
- symbol MAP65-1
- Alias ATMAP65-1,microtubule-associated proteins 65-1
- uniprot Q9FLP0
Descriptions
- Description microtubule-associated proteins 65-1
- Computational description microtubule-associated proteins 65-1 (MAP65-1); FUNCTIONS IN: microtubule binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-2 (TAIR:AT4G26760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000911 | IMP IBA | Gene Ontology | cytokinesis by cell plate formation | 1 2 |
GO:0000226 | IEA | GOA Database | microtubule cytoskeleton organization | |
GO:0000226 | IBA | Gene Ontology | microtubule cytoskeleton organization | 2 |
GO:0000226 | IEA | InterPro | microtubule cytoskeleton organization | |
GO:0048528 | IGI | Gene Ontology | post-embryonic root development | 3 |
GO:0007049 | IEA | GOA Database | cell cycle | |
GO:0051301 | IEA | GOA Database | cell division | |
GO:0031116 | IDA | Gene Ontology | positive regulation of microtubule polymerization | 4 |
GO:0001578 | IDA | Gene Ontology | microtubule bundle formation | 4 |
GO:0007020 | IDA | Gene Ontology | microtubule nucleation | 4 |
GO:0046785 | IDA | Gene Ontology | microtubule polymerization | 5 |
GO:0043622 | IMP | Gene Ontology | cortical microtubule organization | 6 |
GO:0016049 | IGI | Gene Ontology | cell growth | 3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008017 | IEA | GOA Database | microtubule binding | |
GO:0008017 | IDA IBA | Gene Ontology | microtubule binding | 2 7 |
GO:0008017 | IEA | InterPro | microtubule binding | |
GO:0005515 | IPI | Gene Ontology | protein binding | 8 |
GO:0046983 | IPI | Gene Ontology | protein dimerization activity | 9 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009524 | IEA | GOA Database | phragmoplast | |
GO:0009524 | IDA, HDA | Gene Ontology | phragmoplast | 5 10 |
GO:0072686 | IDA | Gene Ontology | mitotic spindle | 3 |
GO:0009536 | HDA | Gene Ontology | plastid | 11 |
GO:0005819 | IEA | GOA Database | spindle | |
GO:0005819 | IDA, HDA IBA | Gene Ontology | spindle | 2 3 10 |
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | HDA IBA | Gene Ontology | cytoplasm | 2 10 |
GO:0005938 | IEA | GOA Database | cell cortex | |
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | HDA ISM | Gene Ontology | nucleus | 10 |
GO:0005856 | IEA | GOA Database | cytoskeleton | |
GO:0005874 | IEA | GOA Database | microtubule | |
GO:0005874 | IDA | Gene Ontology | microtubule | 3 |
GO:0010005 | IDA | Gene Ontology | cortical microtubule, transverse to long axis | 4 |
GO:0009574 | IDA | Gene Ontology | preprophase band | 5 |
GO:0055028 | IDA | Gene Ontology | cortical microtubule | 5 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR007145 | Microtubule-associated protein, MAP65/Ase1/PRC1 |
Mapman id | Description |
---|---|
13.4.3.6 | Cell cycle organisation.cytokinesis.phragmoplast microtubule organization.microtubule-associated protein (MAP65-2) |