Gene: AT5G54780
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G54780
- Transcript Identifier AT5G54780.1
- Gene Type Coding gene
- Location Chr5 : 22248696-22251692 : negative
Gene Family Information
- ID HOM05D001196
- #Genes/#Species 523/98
- Phylogenetic origin
- ID ORTHO05D001673
- #Genes/#Species 371/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G54780.1
- uniprot Q0WV47
Descriptions
- Description Ypt/Rab-GAP domain of gyp1p superfamily protein
- Computational description Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G27100.2); Has 4120 Blast hits to 4004 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 2315; Fungi - 731; Plants - 615; Viruses - 0; Other Eukaryotes - 459 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090630 | IBA | Gene Ontology | activation of GTPase activity | 1 |
| GO:0006886 | IBA | Gene Ontology | intracellular protein transport | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005096 | IBA | Gene Ontology | GTPase activator activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IDA | GOA Database | mitochondrion | |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.4.2.1 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activation.RAB-GTPase-activating protein (RAB-GAP) |