Gene: AT5G54160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G54160
  • Transcript Identifier AT5G54160.1
  • Gene Type Coding gene
  • Location Chr5 : 21982075-21984167 : positive

Gene Family Information

  • ID HOM05D000170
  • #Genes/#Species 2195/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G54160.1
  • symbol OMT1
  • Alias ATOMT1,O-methyltransferase 1,AtCOMT,COMT1,caffeate O-methyltransferase 1,OMT3,O-methyltransferase 3
  • uniprot Q9FK25

Descriptions

  • Description O-methyltransferase 1
  • Computational description O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019438
IBA
Gene Ontologyaromatic compound biosynthetic process1
GO:0032259
IEA
GOA Databasemethylation
GO:0032259
IBA
Gene Ontologymethylation1
GO:0009809
IMP
Gene Ontologylignin biosynthetic process2
GO:0030187
IEA
Gene Ontologymelatonin biosynthetic process
GO:0051555
IDA
Gene Ontologyflavonol biosynthetic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030744
IEA
GOA Databaseluteolin O-methyltransferase activity
GO:0030744
IDA
Gene Ontologyluteolin O-methyltransferase activity3
GO:0008171
IEA
GOA DatabaseO-methyltransferase activity
GO:0008171
IBA
Gene OntologyO-methyltransferase activity1
GO:0008171
IEA
InterProO-methyltransferase activity
GO:0008757
IBA
Gene OntologyS-adenosylmethionine-dependent methyltransferase activity1
GO:0047763
IEA
GOA Databasecaffeate O-methyltransferase activity
GO:0047763
IMP
ISS
Gene Ontologycaffeate O-methyltransferase activity2 3
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0102822
IEA
Gene Ontologyquercetin 3'-O-methyltransferase activity
GO:0030755
IDA
Gene Ontologyquercetin 3-O-methyltransferase activity3
GO:0033799
IDA
Gene Ontologymyricetin 3'-O-methyltransferase activity3
GO:0017096
IEA
Gene Ontologyacetylserotonin O-methyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0005737
IDA
GOA Databasecytoplasm
GO:0005737
HDA
Gene Ontologycytoplasm5
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus5
GO:0005829
HDA
TAS
Gene Ontologycytosol6 7
GO:0009536
HDA
Gene Ontologyplastid8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016461 O-methyltransferase COMT-type
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR001077 O-methyltransferase domain
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR036390 Winged helix DNA-binding domain superfamily
IPR012967 Plant methyltransferase dimerisation
Mapman id Description
21.6.1.7 Cell wall organisation.lignin.monolignol biosynthesis.caffeic acid O-methyltransferase (COMT)