Gene: AT5G52000
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G52000
- Transcript Identifier AT5G52000.1
- Gene Type Coding gene
- Location Chr5 : 21119024-21121119 : negative
Gene Family Information
- ID HOM05D000768
- #Genes/#Species 765/99
- Phylogenetic origin
- ID ORTHO05D000665
- #Genes/#Species 698/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G52000.1
- symbol IMPA-8
- uniprot Q9FJ92
Descriptions
- Description importin alpha isoform 8
- Computational description importin alpha isoform 8 (IMPA-8); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 3277 Blast hits to 2522 proteins in 278 species: Archae - 2; Bacteria - 4; Metazoa - 1316; Fungi - 608; Plants - 711; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048235 | IEP | Gene Ontology | pollen sperm cell differentiation | 1 |
| GO:0006607 | IBA | Gene Ontology | NLS-bearing protein import into nucleus | 2 |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006606 | IEA | GOA Database | protein import into nucleus | |
| GO:0006606 | IEA | InterPro | protein import into nucleus |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008139 | IBA | Gene Ontology | nuclear localization sequence binding | 2 |
| GO:0061608 | IEA | GOA Database | nuclear import signal receptor activity | |
| GO:0061608 | IBA | Gene Ontology | nuclear import signal receptor activity | 2 |
| GO:0061608 | IEA | InterPro | nuclear import signal receptor activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM IEA | Gene Ontology | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IBA | Gene Ontology | nucleus | 2 |
| GO:0005635 | IEA | GOA Database | nuclear envelope |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 23.5.1.2.1 | Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMPA) |