Gene: AT5G51820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G51820
  • Transcript Identifier AT5G51820.1
  • Gene Type Coding gene
  • Location Chr5 : 21063531-21067933 : negative

Gene Family Information

  • ID HOM05D002013
  • #Genes/#Species 329/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G51820.1
  • symbol PGM
  • Alias ATPGMP,ARABIDOPSIS THALIANA PHOSPHOGLUCOMUTASE,PGM1,STF1,STARCH-FREE 1
  • uniprot Q9SCY0

Descriptions

  • Description phosphoglucomutase
  • Computational description phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IMP
IBA
Gene Ontologycarbohydrate metabolic process1 2
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006006
IEA
GOA Databaseglucose metabolic process
GO:0071704
IEA
GOA Databaseorganic substance metabolic process
GO:0071704
IEA
InterProorganic substance metabolic process
GO:0009409
IEP
Gene Ontologyresponse to cold3
GO:0019252
IMP
Gene Ontologystarch biosynthetic process4
GO:0009590
IMP
Gene Ontologydetection of gravity5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004614
IEA
GOA Databasephosphoglucomutase activity
GO:0004614
IDA
ISS, IBA
Gene Ontologyphosphoglucomutase activity2 4 6
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0016868
IEA
GOA Databaseintramolecular transferase activity, phosphotransferases
GO:0016868
IEA
InterProintramolecular transferase activity, phosphotransferases
GO:0000287
IEA
Gene Ontologymagnesium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast7
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope8
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast9
GO:0009570
IDA, HDA
Gene Ontologychloroplast stroma6 10
GO:0010319
IDA
Gene Ontologystromule3
GO:0005829
HDA
IBA, RCA
Gene Ontologycytosol2 11 12

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily
IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
IPR005841 Alpha-D-phosphohexomutase superfamily
IPR005843 Alpha-D-phosphohexomutase, C-terminal
Mapman id Description
3.2.2.2 Carbohydrate metabolism.starch metabolism.biosynthesis.plastidial phosphoglucomutase