Gene: AT5G50800
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G50800
- Transcript Identifier AT5G50800.1
- Gene Type Coding gene
- Location Chr5 : 20665280-20667140 : negative
Gene Family Information
- ID HOM05D000143
- #Genes/#Species 2571/100
- Phylogenetic origin
- ID ORTHO05D000072
- #Genes/#Species 2516/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G50800.1
- symbol SWEET13
- uniprot Q9FGQ2
Descriptions
- Description Nodulin MtN3 family protein
- Computational description Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT4G25010.1); Has 996 Blast hits to 949 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 242; Fungi - 0; Plants - 618; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1905039 | IDA | Gene Ontology | carboxylic acid transmembrane transport | 1 |
| GO:0008643 | IEA | GOA Database | carbohydrate transport | |
| GO:0008643 | IBA | Gene Ontology | carbohydrate transport | 2 |
| GO:0034219 | IEA | GOA Database | carbohydrate transmembrane transport | |
| GO:1905200 | IDA, IGI | Gene Ontology | gibberellic acid transmembrane transport | 1 |
| GO:0080112 | IGI | Gene Ontology | seed growth | 1 |
| GO:0009901 | IGI | Gene Ontology | anther dehiscence | 1 |
| GO:0006869 | IDA | Gene Ontology | lipid transport | 1 |
| GO:0052543 | IGI | Gene Ontology | callose deposition in cell wall | 3 |
| GO:0009555 | IGI | Gene Ontology | pollen development | 3 |
| GO:0015770 | IDA | Gene Ontology | sucrose transport | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051119 | ISS, IBA | Gene Ontology | sugar transmembrane transporter activity | 2 5 |
| GO:1905201 | IDA | Gene Ontology | gibberellin transmembrane transporter activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 6 |
| GO:0008515 | IDA | Gene Ontology | sucrose transmembrane transporter activity | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IBA | Gene Ontology | integral component of membrane | 2 |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 1 |
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005887 | ISS | Gene Ontology | integral component of plasma membrane | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004316 | SWEET sugar transporter |
| Mapman id | Description |
|---|---|
| 24.2.6.1 | Solute transport.carrier-mediated transport.TOC superfamily.sugar efflux transporter (SWEET) |