Gene: AT5G50020
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G50020
- Transcript Identifier AT5G50020.3
- Gene Type Coding gene
- Location Chr5 : 20351591-20354124 : positive
Gene Family Information
- ID HOM05D000571
- #Genes/#Species 969/100
- Phylogenetic origin
- ID ORTHO05D000435
- #Genes/#Species 934/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G50020.3
- uniprot Q8VYS8
Descriptions
- Description DHHC-type zinc finger family protein
- Computational description DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G24630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006612 | IBA | Gene Ontology | protein targeting to membrane | 1 |
| GO:0018230 | IBA | Gene Ontology | peptidyl-L-cysteine S-palmitoylation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019706 | IEA | GOA Database | protein-cysteine S-palmitoyltransferase activity | |
| GO:0019706 | IBA | Gene Ontology | protein-cysteine S-palmitoyltransferase activity | 1 |
| GO:0016746 | IEA | GOA Database | acyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016409 | IEA | GOA Database | palmitoyltransferase activity | |
| GO:0016409 | IEA | InterPro | palmitoyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005783 | IBA | Gene Ontology | endoplasmic reticulum | 1 |
| GO:0005794 | IBA | Gene Ontology | Golgi apparatus | 1 |
| GO:0005886 | IDA IEA | GOA Database | plasma membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001594 | Palmitoyltransferase, DHHC domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |