Gene: AT5G48940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G48940
  • Transcript Identifier AT5G48940.1
  • Gene Type Coding gene
  • Location Chr5 : 19839785-19843744 : positive

Gene Family Information

  • ID HOM05D000029
  • #Genes/#Species 5404/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G48940.1
  • uniprot C0LGV1

Descriptions

  • Description Leucine-rich repeat transmembrane protein kinase family protein
  • Computational description Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
Gene Ontologyprotein phosphorylation
GO:0006468
IEA
InterProprotein phosphorylation
GO:0010074
IMP
GOA Databasemaintenance of meristem identity
GO:0016310
IEA
GOA Databasephosphorylation
GO:0010082
IGI
Gene Ontologyregulation of root meristem growth1
GO:2000280
IMP
Gene Ontologyregulation of root development2
GO:0010449
IGI
Gene Ontologyroot meristem growth2
GO:0010078
IMP
Gene Ontologymaintenance of root meristem identity2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0042277
IPI
Gene Ontologypeptide binding2
GO:0001653
IMP
Gene Ontologypeptide receptor activity2
GO:0106311
IEA
Gene Ontologyprotein threonine kinase activity
GO:0106310
IEA
Gene Ontologyprotein serine kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
ISM, IBA
Gene Ontologyplasma membrane3
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011009 Protein kinase-like domain superfamily
IPR032675 Leucine-rich repeat domain superfamily
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR013210 Leucine-rich repeat-containing N-terminal, plant-type
IPR003591 Leucine-rich repeat, typical subtype
IPR000719 Protein kinase domain
IPR001611 Leucine-rich repeat
Mapman id Description
11.10.1.8.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.GLV/RGF/CLEL-peptide activity.RGF-peptide receptor (RGFR)
18.4.1.11 Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-XI)