Gene: AT5G48540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G48540
  • Transcript Identifier AT5G48540.1
  • Gene Type Coding gene
  • Location Chr5 : 19669096-19669887 : negative

Gene Family Information

  • ID HOM05D000022
  • #Genes/#Species 6093/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G48540.1
  • uniprot Q9LV60

Descriptions

  • Description receptor-like protein kinase-related family protein
  • Computational description receptor-like protein kinase-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Receptor-like protein kinase-related family protein (TAIR:AT3G22060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080167
IEP
GOA Databaseresponse to karrikin
GO:0006468
ISO
PLAZA Homology (enrichment)protein phosphorylation HOM05D000022

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000022
GO:0004672
ISO
PLAZA Homology (enrichment)protein kinase activity HOM05D000022

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0099503
HDA
Gene Ontologysecretory vesicle1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002902 Gnk2-homologous domain
IPR038408 Gnk2-homologous domain superfamily
Mapman id Description
35.1 not assigned.annotated