Gene: AT5G48100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G48100
  • Transcript Identifier AT5G48100.1
  • Gene Type Coding gene
  • Location Chr5 : 19489530-19492582 : negative

Gene Family Information

  • ID HOM05D000080
  • #Genes/#Species 3730/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G48100.1
  • symbol TT10
  • Alias ATLAC15,AtTT10,LAC15,LACCASE-LIKE 15
  • full_name TRANSPARENT TESTA 10
  • uniprot Q84J37

Descriptions

  • Description Laccase/Diphenol oxidase family protein
  • Computational description TRANSPARENT TESTA 10 (TT10); FUNCTIONS IN: copper ion binding, laccase activity; INVOLVED IN: lignin biosynthetic process, response to copper ion, flavonoid biosynthetic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 14 (TAIR:AT5G09360.1); Has 10402 Blast hits to 8649 proteins in 1516 species: Archae - 36; Bacteria - 4416; Metazoa - 511; Fungi - 3532; Plants - 1551; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046274
IEA
GOA Databaselignin catabolic process
GO:0046274
IEA
InterProlignin catabolic process
GO:0009813
IMP
Gene Ontologyflavonoid biosynthetic process1
GO:0046688
IEP
Gene Ontologyresponse to copper ion2
GO:0010023
IMP
Gene Ontologyproanthocyanidin biosynthetic process3
GO:0009809
IMP
Gene Ontologylignin biosynthetic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IBA
Gene Ontologyoxidoreductase activity4
GO:0016491
IEA
InterProoxidoreductase activity
GO:0052716
IEA
Gene Ontologyhydroquinone:oxygen oxidoreductase activity
GO:0052716
IEA
InterProhydroquinone:oxygen oxidoreductase activity
GO:0005507
IEA
GOA Databasecopper ion binding
GO:0005507
ISS
Gene Ontologycopper ion binding5
GO:0005507
IEA
InterProcopper ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034288 Laccase, first cupredoxin domain
IPR045087 Multicopper oxidase
IPR008972 Cupredoxin
IPR011707 Multicopper oxidase, N-termianl
IPR017761 Laccase
IPR001117 Multicopper oxidase, type 1
IPR011706 Multicopper oxidase, C-terminal
IPR034285 Laccase, second cupredoxin domain
IPR034289 Laccase, third cupredoxin domain
Mapman id Description
50.1.10 Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor