Gene: AT5G47800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G47800
  • Transcript Identifier AT5G47800.3
  • Gene Type Coding gene
  • Location Chr5 : 19354171-19356126 : positive

Gene Family Information

  • ID HOM05D000091
  • #Genes/#Species 3486/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G47800.3
  • uniprot Q9FIK1

Descriptions

  • Description Phototropic-responsive NPH3 family protein
  • Computational description Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G67900.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011333 SKP1/BTB/POZ domain superfamily
IPR027356 NPH3 domain
IPR000210 BTB/POZ domain
IPR043454 NPH3/RPT2-like family
Mapman id Description
35.1 not assigned.annotated