Gene: AT5G47660

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G47660
  • Transcript Identifier AT5G47660.1
  • Gene Type Coding gene
  • Location Chr5 : 19313008-19314636 : positive

Gene Family Information

  • ID HOM05D000547
  • #Genes/#Species 1000/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G47660.1
  • uniprot Q9FGJ1

Descriptions

  • Description Homeodomain-like superfamily protein
  • Computational description Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MADF domain (InterPro:IPR006578), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G28300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR044822 Myb/SANT-like DNA-binding domain 4
IPR001005 SANT/Myb domain
Mapman id Description
15.5.20 RNA biosynthesis.transcriptional regulation.transcription factor (Trihelix)