Gene: AT5G45150

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G45150
  • Transcript Identifier AT5G45150.2
  • Gene Type Coding gene
  • Location Chr5 : 18261336-18264346 : positive

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G45150.2
  • symbol RTL3
  • uniprot Q9FKF0

Descriptions

  • Description RNAse THREE-like protein 3
  • Computational description RNAse THREE-like protein 3 (RTL3); FUNCTIONS IN: double-stranded RNA binding, RNA binding, ribonuclease III activity; INVOLVED IN: RNA processing; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: RNAse THREE-like protein 2 (TAIR:AT3G20420.1); Has 6508 Blast hits to 5064 proteins in 1836 species: Archae - 0; Bacteria - 4133; Metazoa - 528; Fungi - 225; Plants - 454; Viruses - 14; Other Eukaryotes - 1154 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006396
IEA
Gene OntologyRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0030422
IBA
Gene Ontologyproduction of siRNA involved in RNA interference1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004525
IBA
IEA
Gene Ontologyribonuclease III activity1
GO:0004525
IEA
InterProribonuclease III activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IBA
Gene OntologyRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
Gene Ontologynucleus1
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000999 Ribonuclease III domain
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR014720 Double-stranded RNA-binding domain
Mapman id Description
35.1 not assigned.annotated