Gene: AT5G45100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G45100
  • Transcript Identifier AT5G45100.1
  • Gene Type Coding gene
  • Location Chr5 : 18218769-18219741 : positive

Gene Family Information

  • ID HOM05D000410
  • #Genes/#Species 1238/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G45100.1
  • symbol BRG1
  • full_name BOI-related gene 1
  • uniprot Q9FHE4

Descriptions

  • Description SBP (S-ribonuclease binding protein) family protein
  • Computational description SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT4G19700.1); Has 499 Blast hits to 499 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 2; Plants - 326; Viruses - 11; Other Eukaryotes - 39 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IEA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043067
IMP
IBA
Gene Ontologyregulation of programmed cell death1 2
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
IBA
Gene Ontologyubiquitin-protein transferase activity1 2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR017066 E3 ubiquitin-protein ligase BOI-like
Mapman id Description
19.2.2.1.4.3.11 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (BRG)