Gene: AT5G43870
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G43870
- Transcript Identifier AT5G43870.1
- Gene Type Coding gene
- Location Chr5 : 17632538-17635863 : negative
Gene Family Information
- ID HOM05D000814
- #Genes/#Species 726/96
- Phylogenetic origin
- ID ORTHO05D001161
- #Genes/#Species 470/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G43870.1
- uniprot Q9LKC2
Descriptions
- Description auxin canalization protein (DUF828)
- Computational description FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007165 | ISS | Gene Ontology | signal transduction | 1 |
| GO:0006892 | IDA | Gene Ontology | post-Golgi vesicle-mediated transport | 2 |
| GO:0009734 | IBA | Gene Ontology | auxin-activated signaling pathway | 3 |
| GO:0010087 | IBA | Gene Ontology | phloem or xylem histogenesis | 3 |
| GO:0010305 | IBA | Gene Ontology | leaf vascular tissue pattern formation | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035091 | ISS | Gene Ontology | phosphatidylinositol binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005802 | IDA | Gene Ontology | trans-Golgi network | 2 |
| GO:0005886 | IDA | GOA Database | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |