Gene: AT5G43640

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G43640
  • Transcript Identifier AT5G43640.1
  • Gene Type Coding gene
  • Location Chr5 : 17531302-17532370 : positive

Gene Family Information

  • ID HOM05D000856
  • #Genes/#Species 696/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G43640.1
  • uniprot Q9FIX6

Descriptions

  • Description Ribosomal protein S19 family protein
  • Computational description Ribosomal protein S19 family protein; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19 family protein (TAIR:AT5G09500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
Gene OntologyRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002222 Ribosomal protein S19/S15
IPR023575 Ribosomal protein S19/S15, superfamily
IPR005713 Ribosomal protein S19A/S15e
Mapman id Description
17.1.3.1.16 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS15