Gene: AT5G43090
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G43090
- Transcript Identifier AT5G43090.1
- Gene Type Coding gene
- Location Chr5 : 17295933-17298171 : positive
Gene Family Information
- ID HOM05D000867
- #Genes/#Species 692/100
- Phylogenetic origin
- ID ORTHO05D012986
- #Genes/#Species 19/10
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G43090.1
- symbol PUM13
- Alias APUM13,pumilio 13
- uniprot Q9FMH4
Descriptions
- Description pumilio 13
- Computational description pumilio 13 (PUM13); FUNCTIONS IN: RNA binding, binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 14 (TAIR:AT5G43110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010608 | IBA | Gene Ontology | posttranscriptional regulation of gene expression | 1 |
| GO:0006417 | IEA | GOA Database | regulation of translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IBA | Gene Ontology | mRNA binding | 1 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 1 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G43110 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |