Gene: AT5G43060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G43060
  • Transcript Identifier AT5G43060.1
  • Gene Type Coding gene
  • Location Chr5 : 17269784-17272117 : negative

Gene Family Information

  • ID HOM05D000069
  • #Genes/#Species 3952/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G43060.1
  • symbol RD21B
  • full_name esponsive to dehydration 21B
  • uniprot Q9FMH8

Descriptions

  • Description Granulin repeat cysteine protease family protein
  • Computational description Granulin repeat cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Granulin (InterPro:IPR000118), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT1G47128.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development Os04g0670500
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis
GO:0051603
IBA
Gene Ontologyproteolysis involved in cellular protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008234
IEA
InterProcysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004197
IBA
Gene Ontologycysteine-type endopeptidase activity1
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole3
GO:0005783
IDA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum4
GO:0005829
IDA
GOA Databasecytosol
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005615
IBA
Gene Ontologyextracellular space1
GO:0005764
IBA
Gene Ontologylysosome1
GO:0099503
HDA
Gene Ontologysecretory vesicle5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000118 Granulin
IPR037277 Granulin superfamily
IPR013201 Cathepsin propeptide inhibitor domain (I29)
IPR000668 Peptidase C1A, papain C-terminal
IPR038765 Papain-like cysteine peptidase superfamily
IPR039417 Papain-like cysteine endopeptidase
Mapman id Description
19.4.1.1 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C1-class protease (Papain)