Gene: AT5G42420
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G42420
- Transcript Identifier AT5G42420.1
- Gene Type Coding gene
- Location Chr5 : 16968819-16970225 : positive
Gene Family Information
- ID HOM05D000587
- #Genes/#Species 947/100
- Phylogenetic origin
- ID ORTHO05D000929
- #Genes/#Species 548/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G42420.1
- Alias URGT3,UDP-Rha/UDP-Gal transporter 3
- uniprot Q9FIH5
Descriptions
- Description Nucleotide-sugar transporter family protein
- Computational description Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G21070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1901264 | IEA | GOA Database | carbohydrate derivative transport | |
| GO:0008643 | IEA | GOA Database | carbohydrate transport | |
| GO:0015931 | IEA | GOA Database | nucleobase-containing compound transport | |
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0072334 | IEA | GOA Database | UDP-galactose transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015297 | IEA | GOA Database | antiporter activity | |
| GO:0015297 | IDA IBA | Gene Ontology | antiporter activity | 1 2 |
| GO:0005338 | IBA | Gene Ontology | nucleotide-sugar transmembrane transporter activity | 1 |
| GO:0005459 | IBA | Gene Ontology | UDP-galactose transmembrane transporter activity | 1 |
| GO:0022857 | IDA | Gene Ontology | transmembrane transporter activity | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | IDA, HDA IBA | Gene Ontology | Golgi apparatus | 1 2 3 |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0005886 | ISM | Gene Ontology | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004853 | Sugar phosphate transporter domain |
| Mapman id | Description |
|---|---|
| 24.2.1.1.3 | Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (URGT/UXT) |