Gene: AT5G42080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G42080
  • Transcript Identifier AT5G42080.1
  • Gene Type Coding gene
  • Location Chr5 : 16820661-16824536 : negative

Gene Family Information

  • ID HOM05D000331
  • #Genes/#Species 1415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G42080.1
  • symbol DL1
  • Alias ADL1A,ADL1,dynamin-like protein,AG68,DRP1A,DYNAMIN-RELATED PROTEIN 1A,RSW9,RADIAL SWELLING 9
  • uniprot P42697

Descriptions

  • Description dynamin-like protein
  • Computational description dynamin-like protein (DL1); FUNCTIONS IN: protein binding, clathrin binding, GTP binding, GTPase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1B (TAIR:AT3G61760.1); Has 2870 Blast hits to 2761 proteins in 321 species: Archae - 2; Bacteria - 66; Metazoa - 1056; Fungi - 810; Plants - 578; Viruses - 0; Other Eukaryotes - 358 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006898
IBA
Gene Ontologyreceptor-mediated endocytosis1
GO:0080029
IMP
Gene Ontologycellular response to boron-containing substance levels2
GO:0010036
IMP
Gene Ontologyresponse to boron-containing substance2
GO:0006886
IMP
Gene Ontologyintracellular protein transport2
GO:0007049
IEA
GOA Databasecell cycle
GO:0051301
IEA
GOA Databasecell division
GO:0015031
IEA
GOA Databaseprotein transport
GO:0080157
IMP
Gene Ontologyregulation of plant-type cell wall organization or biogenesis3
GO:0030100
IMP
Gene Ontologyregulation of endocytosis3
GO:0009920
IDA, IMP, IGI
Gene Ontologycell plate formation involved in plant-type cell wall biogenesis3 4 5
GO:0010051
IMP
Gene Ontologyxylem and phloem pattern formation6
GO:2000694
IMP
Gene Ontologyregulation of phragmoplast microtubule organization3
GO:0010091
IMP
Gene Ontologytrichome branching4
GO:0009793
IGI
Gene Ontologyembryo development ending in seed dormancy4
GO:0000911
IGI
Gene Ontologycytokinesis by cell plate formation4
GO:0048480
IMP
Gene Ontologystigma development7
GO:0072583
IDA
Gene Ontologyclathrin-dependent endocytosis8
GO:1905952
IDA
Gene Ontologyregulation of lipid localization5
GO:0048766
IMP
Gene Ontologyroot hair initiation9
GO:2000114
IMP
Gene Ontologyregulation of establishment of cell polarity9

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008017
IBA
Gene Ontologymicrotubule binding1
GO:0003924
IDA
IBA
IEA
Gene OntologyGTPase activity1 6
GO:0003924
IEA
InterProGTPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0005515
IPI
Gene Ontologyprotein binding6
GO:0043424
IPI
Gene Ontologyprotein histidine kinase binding10
GO:0030276
IDA
Gene Ontologyclathrin binding8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM, IBA
Gene Ontologycytoplasm1 11
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA, HDA
IBA
Gene Ontologyplasma membrane1 8 12
GO:0005938
IEA
GOA Databasecell cortex
GO:0005938
IDA
Gene Ontologycell cortex7
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005856
IDA
Gene Ontologycytoskeleton11
GO:0030136
IEA
GOA Databaseclathrin-coated vesicle
GO:0030136
IDA
Gene Ontologyclathrin-coated vesicle7
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005874
IDA
IBA
Gene Ontologymicrotubule1 6
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane1
GO:0009524
IEA
GOA Databasephragmoplast
GO:0009524
IDA
Gene Ontologyphragmoplast3
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane13
GO:0009536
HDA
Gene Ontologyplastid14
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005773
IDA
GOA Databasevacuole
GO:0005829
IDA
GOA Databasecytosol
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma15
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0000325
HDA
Gene Ontologyplant-type vacuole16
GO:0009504
IDA
Gene Ontologycell plate4
GO:0045334
IDA
Gene Ontologyclathrin-coated endocytic vesicle8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000375 Dynamin stalk domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR022812 Dynamin
IPR045063 Dynamin, N-terminal
IPR001401 Dynamin, GTPase domain
IPR003130 Dynamin GTPase effector
Mapman id Description
13.4.2.6 Cell cycle organisation.cytokinesis.cell-plate formation.phragmoplastin (DRP1)