Gene: AT5G40360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G40360
  • Transcript Identifier AT5G40360.1
  • Gene Type Coding gene
  • Location Chr5 : 16145220-16146579 : positive

Gene Family Information

  • ID HOM05D000119
  • #Genes/#Species 2812/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G40360.1
  • symbol MYB115
  • Alias AtMYB115,myb domain protein 115
  • uniprot Q1PDP9

Descriptions

  • Description myb domain protein 115
  • Computational description myb domain protein 115 (MYB115); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045723
IGI
Gene Ontologypositive regulation of fatty acid biosynthetic process1
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated2 3
GO:2001280
IMP
Gene Ontologypositive regulation of unsaturated fatty acid biosynthetic process1
GO:2000014
IMP
Gene Ontologyregulation of endosperm development1
GO:0055089
IMP
Gene Ontologyfatty acid homeostasis1
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0009960
IGI
Gene Ontologyendosperm development1
GO:0010439
IGI
Gene Ontologyregulation of glucosinolate biosynthetic process4
GO:0010262
IMP
Gene Ontologysomatic embryogenesis5
GO:0010228
IMP
Gene Ontologyvegetative to reproductive phase transition of meristem5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding1
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding3
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific3
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity1 2
GO:0043565
IPI
Gene Ontologysequence-specific DNA binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)