Gene: AT5G39610
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G39610
- Transcript Identifier AT5G39610.1
- Gene Type Coding gene
- Location Chr5 : 15858591-15859650 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000302
- #Genes/#Species 1157/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G39610.1
- symbol NAC6
- Alias ANAC092,Arabidopsis NAC domain containing protein 92,ATNAC2,NAC domain containing protein 2,ATNAC6,NAC domain containing protein 6,NAC2,NAC domain containing protein 2,ORE1,ORESARA 1
- full_name NAC domain containing protein 6
- uniprot Q9FKA0
Descriptions
- Description NAC domain containing protein 6
- Computational description NAC domain containing protein 6 (NAC6); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 3 (TAIR:AT3G29035.1); Has 3041 Blast hits to 3034 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3041; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010029 | IMP | Gene Ontology | regulation of seed germination | 1 |
GO:0010150 | IMP, IEP | Gene Ontology | leaf senescence | 1 2 |
GO:0010468 | IMP | Gene Ontology | regulation of gene expression | 1 |
GO:0042542 | IEP | Gene Ontology | response to hydrogen peroxide | 3 |
GO:1902074 | IEP | Gene Ontology | response to salt | 3 |
GO:0090400 | IMP | Gene Ontology | stress-induced premature senescence | 4 |
GO:1904250 | IMP | Gene Ontology | positive regulation of age-related resistance | 5 |
GO:0045893 | IDA | Gene Ontology | positive regulation of transcription, DNA-templated | 6 |
GO:0080187 | IMP | Gene Ontology | floral organ senescence | 6 |
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0009737 | IEP | Gene Ontology | response to abscisic acid | 7 |
GO:0006979 | IMP | Gene Ontology | response to oxidative stress | 8 |
GO:1900057 | IMP | Gene Ontology | positive regulation of leaf senescence | 8 |
GO:0009651 | IEP | Gene Ontology | response to salt stress | 7 |
GO:0009723 | IEP | Gene Ontology | response to ethylene | 7 |
GO:0009733 | IEP | Gene Ontology | response to auxin | 7 |
GO:0048527 | IMP | Gene Ontology | lateral root development | 7 |
GO:0051091 | IDA | Gene Ontology | positive regulation of DNA-binding transcription factor activity | 7 |
GO:0043068 | IMP | Gene Ontology | positive regulation of programmed cell death | 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IPI | Gene Ontology | protein binding | 9 |
GO:0003700 | IPI, IMP ISS | Gene Ontology | DNA-binding transcription factor activity | 7 10 11 |
GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 11 |
GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 12 |
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0042803 | IDA, IPI | Gene Ontology | protein homodimerization activity | 7 |
GO:0046982 | IPI | Gene Ontology | protein heterodimerization activity | 7 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA ISM | Gene Ontology | nucleus | 7 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |