Gene: AT5G39270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G39270
  • Transcript Identifier AT5G39270.1
  • Gene Type Coding gene
  • Location Chr5 : 15729118-15730198 : negative

Gene Family Information

  • ID HOM05D000114
  • #Genes/#Species 2914/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G39270.1
  • symbol EXPA22
  • Alias ATEXP22,ATEXPA22,expansin A22,ATHEXP ALPHA 1.15,EXP22,EXPANSIN 22
  • uniprot Q9FL80

Descriptions

  • Description expansin A22
  • Computational description expansin A22 (EXPA22); INVOLVED IN: unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: extracellular region; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A26 (TAIR:AT5G39290.1); Has 2178 Blast hits to 2172 proteins in 156 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 40; Plants - 2089; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009664
IEA
Gene Ontologyplant-type cell wall organization
GO:0009664
IEA
InterProplant-type cell wall organization
GO:0009826
NAS
Gene Ontologyunidimensional cell growth1
GO:0009828
NAS
Gene Ontologyplant-type cell wall loosening1
GO:0071555
IEA
GOA Databasecell wall organization

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005576
IEA
InterProextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007112 Expansin/pollen allergen, DPBB domain
IPR007117 Expansin, cellulose-binding-like domain
IPR036908 RlpA-like domain superfamily
IPR002963 Expansin
IPR036749 Expansin, cellulose-binding-like domain superfamily
IPR009009 RlpA-like protein, double-psi beta-barrel domain
IPR007118 Expansin/Lol pI
Mapman id Description
21.4.2.1 Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin