Gene: AT5G33210

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G33210
  • Transcript Identifier AT5G33210.2
  • Gene Type Coding gene
  • Location Chr5 : 12464858-12465473 : negative

Gene Family Information

  • ID HOM05D000711
  • #Genes/#Species 809/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G33210.2
  • symbol SRS8
  • uniprot F4KH89

Descriptions

  • Description SHI-related sequence 8
  • Computational description SHI-related sequence 8 (SRS8); CONTAINS InterPro DOMAIN/s: Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1); Has 305 Blast hits to 305 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Computational description SHI-related sequence 8 (SRS8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF702 (InterPro:IPR007818), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510); BEST Arabidopsis thaliana protein match is: Lateral root primordium (LRP) protein-related (TAIR:AT3G51060.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IBA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0009851
IEA
GOA Databaseauxin biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IBA
Gene OntologyDNA binding1
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISS, ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007818 SHI protein family
IPR006510 Zinc finger, lateral root primordium type 1
Mapman id Description
15.5.45 RNA biosynthesis.transcriptional regulation.transcription factor (SRS)