Gene: AT5G28780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G28780
  • Transcript Identifier AT5G28780.1
  • Gene Type Coding gene
  • Location Chr5 : 10812907-10814173 : negative

Gene Family Information

  • ID HOM05D000096
  • #Genes/#Species 3329/72
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G28780.1
  • uniprot F4KA12

Descriptions

  • Description PIF1 helicase
  • Computational description PIF1 helicase; CONTAINS InterPro DOMAIN/s: DNA helicase PIF1, ATP-dependent (InterPro:IPR010285); BEST Arabidopsis thaliana protein match is: PIF1 helicase (TAIR:AT3G51690.1); Has 1364 Blast hits to 1355 proteins in 303 species: Archae - 2; Bacteria - 367; Metazoa - 234; Fungi - 111; Plants - 389; Viruses - 9; Other Eukaryotes - 252 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000723
IEA
Gene Ontologytelomere maintenance
GO:0000723
IEA
InterProtelomere maintenance
GO:0006260
IBA
Gene OntologyDNA replication1
GO:0032508
IBA
Gene OntologyDNA duplex unwinding1
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003678
IEA
Gene OntologyDNA helicase activity
GO:0003678
IEA
InterProDNA helicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005657
IBA
Gene Ontologyreplication fork1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010285 DNA helicase Pif1-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated