Gene: AT5G28690
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G28690
- Transcript Identifier AT5G28690.2
- Gene Type Coding gene
- Location Chr5 : 10723033-10723702 : positive
Gene Family Information
- ID HOM05D000925
- #Genes/#Species 651/94
- Phylogenetic origin
- ID ORTHO05D001623
- #Genes/#Species 379/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G28690.2
- uniprot Q6NQD5
Descriptions
- Description carboxylate clamp-TPR protein (DUF1685)
- Computational description Protein of unknown function (DUF1685); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1685) (TAIR:AT3G04700.1); Has 207 Blast hits to 207 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043571 | IEA | Gene Ontology | maintenance of CRISPR repeat elements | |
| GO:0043571 | IEA | InterPro | maintenance of CRISPR repeat elements | |
| GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004521 | IEA | Gene Ontology | endoribonuclease activity | |
| GO:0004521 | IEA | InterPro | endoribonuclease activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |