Gene: AT5G28300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G28300
  • Transcript Identifier AT5G28300.1
  • Gene Type Coding gene
  • Location Chr5 : 10292789-10295101 : negative

Gene Family Information

  • ID HOM05D000547
  • #Genes/#Species 1000/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G28300.1
  • Alias AtGT2L,GT2L,GT-2Like protein
  • uniprot Q8H181

Descriptions

  • Description Duplicated homeodomain-like superfamily protein
  • Computational description Duplicated homeodomain-like superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT1G76890.2); Has 7371 Blast hits to 5463 proteins in 307 species: Archae - 4; Bacteria - 202; Metazoa - 744; Fungi - 303; Plants - 759; Viruses - 16; Other Eukaryotes - 5343 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000987
IDA
Gene Ontologycis-regulatory region sequence-specific DNA binding2
GO:0005516
IDA
Gene Ontologycalmodulin binding2
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044822 Myb/SANT-like DNA-binding domain 4
Mapman id Description
15.5.20 RNA biosynthesis.transcriptional regulation.transcription factor (Trihelix)