Gene: AT5G27780
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G27780
- Transcript Identifier AT5G27780.1
- Gene Type Coding gene
- Location Chr5 : 9838885-9839313 : negative
Gene Family Information
- ID HOM05D000695
- #Genes/#Species 819/82
- Phylogenetic origin
- ID ORTHO05D000615
- #Genes/#Species 739/81
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G27780.1
- symbol SAUR75
- full_name SMALL AUXIN UP RNA 75
- uniprot Q3E901
Descriptions
- Description SAUR-like auxin-responsive protein family
- Computational description SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | IEA | Gene Ontology | response to auxin | |
| GO:0009733 | IEA | InterPro | response to auxin | |
| GO:0009926 | ISO | PLAZA Integrative Orthology | auxin polar transport | AT1G29440 |
| GO:0080086 | ISO | PLAZA Integrative Orthology | stamen filament development | AT1G29440 |
| GO:0042255 | ISO | PLAZA Integrative Orthology | ribosome assembly | AT1G29430 |
| GO:2000012 | ISO | PLAZA Integrative Orthology | regulation of auxin polar transport | Os09g0545300 |
| GO:0046621 | ISO | PLAZA Integrative Orthology | negative regulation of organ growth | Os09g0545300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G29430 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G29430 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os09g0545300 |
| GO:0090406 | ISO | PLAZA Integrative Orthology | pollen tube | AT1G29430 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003676 | Small auxin-up RNA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |