Gene: AT5G27600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G27600
  • Transcript Identifier AT5G27600.1
  • Gene Type Coding gene
  • Location Chr5 : 9742616-9746795 : positive

Gene Family Information

  • ID HOM05D000324
  • #Genes/#Species 1429/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G27600.1
  • symbol LACS7
  • Alias ATLACS7
  • uniprot Q8LKS5

Descriptions

  • Description long-chain acyl-CoA synthetase 7
  • Computational description long-chain acyl-CoA synthetase 7 (LACS7); FUNCTIONS IN: protein binding, long-chain fatty acid-CoA ligase activity; INVOLVED IN: response to salt stress, long-chain fatty acid metabolic process, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: long-chain acyl-CoA synthetase 6 (TAIR:AT3G05970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0001676
IEA
GOA Databaselong-chain fatty acid metabolic process
GO:0001676
TAS
Gene Ontologylong-chain fatty acid metabolic process
GO:0006631
IEA
GOA Databasefatty acid metabolic process
GO:0006631
TAS
Gene Ontologyfatty acid metabolic process1
GO:0010193
IEP
Gene Ontologyresponse to ozone2
GO:0009651
IEP
Gene Ontologyresponse to salt stress2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0004467
IEA
GOA Databaselong-chain fatty acid-CoA ligase activity
GO:0004467
IDA
IBA
TAS
Gene Ontologylong-chain fatty acid-CoA ligase activity1 2 3
GO:0102391
IEA
GOA Databasedecanoate-CoA ligase activity
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IBA
Gene Ontologymembrane3
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IDA, HDA
TAS
Gene Ontologyperoxisome2 4 5
GO:0005783
IBA
Gene Ontologyendoplasmic reticulum3
GO:0009536
HDA
Gene Ontologyplastid6
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042099 ANL, N-terminal domain
IPR000873 AMP-dependent synthetase/ligase
Mapman id Description
5.7.3.1 Lipid metabolism.lipid degradation.fatty acid degradation.peroxisomal long-chain acyl-CoA synthetase (LACS6/7)