Gene: AT5G27350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G27350
  • Transcript Identifier AT5G27350.1
  • Gene Type Coding gene
  • Location Chr5 : 9648958-9654176 : positive

Gene Family Information

  • ID HOM05D000205
  • #Genes/#Species 1943/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G27350.1
  • symbol SFP1
  • uniprot Q94CI7

Descriptions

  • Description Major facilitator superfamily protein
  • Computational description SFP1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G27360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009624
HEP
Gene Ontologyresponse to nematode1
GO:0034219
IEA
GOA Databasecarbohydrate transmembrane transport
GO:0008643
IEA
GOA Databasecarbohydrate transport
GO:0008643
IEA
InterProcarbohydrate transport
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015144
ISS
Gene Ontologycarbohydrate transmembrane transporter activity
GO:0051119
IEA
Gene Ontologysugar transmembrane transporter activity
GO:0051119
IEA
InterProsugar transmembrane transporter activity
GO:0022857
IEA
GOA Databasetransmembrane transporter activity
GO:0022857
IEA
InterProtransmembrane transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036259 MFS transporter superfamily
IPR003663 Sugar/inositol transporter
IPR044775 Sugar transporter ERD6/Tret1-like
IPR005828 Major facilitator, sugar transporter-like
Mapman id Description
24.2.2.1.5 Solute transport.carrier-mediated transport.MFS superfamily.SP family.monosaccharide transporter (ERD6)