Gene: AT5G26900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G26900
  • Transcript Identifier AT5G26900.1
  • Gene Type Coding gene
  • Location Chr5 : 9463752-9465086 : positive

Gene Family Information

  • ID HOM05D000526
  • #Genes/#Species 1037/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G26900.1
  • symbol CDC20.4
  • Alias AtCDC20.4
  • full_name cell division cycle 20.4
  • uniprot Q4PSE4

Descriptions

  • Description Transducin family protein / WD-40 repeat family protein
  • Computational description Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT5G27080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1904668
IEA
Gene Ontologypositive regulation of ubiquitin protein ligase activity
GO:1904668
IEA
InterPropositive regulation of ubiquitin protein ligase activity
GO:0051301
IEA
GOA Databasecell division
GO:0007049
IEA
GOA Databasecell cycle
GO:1905786
IBA
Gene Ontologypositive regulation of anaphase-promoting complex-dependent catabolic process1
GO:0031145
IBA
Gene Ontologyanaphase-promoting complex-dependent catabolic process1
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT5G27570
GO:0005515
IEA
InterProprotein binding
GO:0097027
IEA
GOA Databaseubiquitin-protein transferase activator activity
GO:0097027
IEA
InterProubiquitin-protein transferase activator activity
GO:0010997
IEA
GOA Databaseanaphase-promoting complex binding
GO:0010997
IBA
Gene Ontologyanaphase-promoting complex binding1
GO:0010997
IEA
InterProanaphase-promoting complex binding
GO:1990757
IBA
Gene Ontologyubiquitin ligase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IDA
ISM
Gene Ontologynucleus2
GO:0005680
IBA
Gene Ontologyanaphase-promoting complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033010 The WD repeat Cdc20/Fizzy family
IPR001680 WD40 repeat
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
13.3.3.1.4 Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.activator protein (CDC20)