Gene: AT5G25460

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G25460
  • Transcript Identifier AT5G25460.1
  • Gene Type Coding gene
  • Location Chr5 : 8863430-8865394 : positive

Gene Family Information

  • ID HOM05D000636
  • #Genes/#Species 893/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G25460.1
  • symbol DGR2
  • full_name DUF642 L-GalL responsive gene 2
  • uniprot Q94F20

Descriptions

  • Description transmembrane protein, putative (Protein of unknown function, DUF642)
  • Computational description Protein of unknown function, DUF642; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G11420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010015
IMP
Gene Ontologyroot morphogenesis1
GO:0080167
IEP
GOA Databaseresponse to karrikin

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009505
IDA
GOA Databaseplant-type cell wall
GO:0009505
HDA
IBA
Gene Ontologyplant-type cell wall2 3
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0009536
HDA
Gene Ontologyplastid5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008979 Galactose-binding-like domain superfamily
IPR006946 Domain of unknown function DUF642
Mapman id Description
35.1 not assigned.annotated