Gene: AT5G24300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G24300
  • Transcript Identifier AT5G24300.1
  • Gene Type Coding gene
  • Location Chr5 : 8266934-8270860 : positive

Gene Family Information

  • ID HOM05D000513
  • #Genes/#Species 1048/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G24300.1
  • symbol SS1
  • Alias ATSS1,STARCH SYNTHASE 1
  • full_name starch synthase 1
  • uniprot Q9FNF2

Descriptions

  • Description Glycogen/starch synthases, ADP-glucose type
  • Computational description SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: amylopectin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: starch synthase 2 (TAIR:AT3G01180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010021
IEA
GOA Databaseamylopectin biosynthetic process
GO:0010021
IDA
Gene Ontologyamylopectin biosynthetic process1
GO:0009960
IEA
GOA Databaseendosperm development
GO:0019252
IEA
Gene Ontologystarch biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016757
IEA
InterProglycosyltransferase activity
GO:0004373
IEA
Gene Ontologyglycogen (starch) synthase activity
GO:0004373
IEA
InterProglycogen (starch) synthase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0009011
IEA
GOA Databasestarch synthase activity
GO:0009011
IDA
Gene Ontologystarch synthase activity1
GO:0033201
IEA
Gene Ontologyalpha-1,4-glucan synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM, IBA
Gene Ontologychloroplast1 2 3
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid4
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma5
GO:0009501
IEA
GOA Databaseamyloplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011835 Bacterial/plant glycogen synthase
IPR013534 Starch synthase, catalytic domain
IPR001296 Glycosyl transferase, family 1
Mapman id Description
3.2.2.4.1 Carbohydrate metabolism.starch metabolism.biosynthesis.starch synthase activities.starch synthase (SSI)